One of the key assumptions in linear regression is that there is no correlation between the residuals, e.g. the residuals are independent.
To test for first-order autocorrelation, we can perform a Durbin-Watson test. However, if we’d like to test for autocorrelation at higher orders then we need to perform a Breusch-Godfrey test.
This test uses the following hypotheses:
H0 (null hypothesis): There is no autocorrelation at any order less than or equal to p.
HA (alternative hypothesis): There exists autocorrelation at some order less than or equal to p.
The test statistic follows a Chi-Square distribution with p degrees of freedom.
If the p-value that corresponds to this test statistic is less than a certain significance level (e.g. 0.05) then we can reject the null hypothesis and conclude that autocorrelation exists among the residuals at some order less than or equal to p.
To perform a Breusch-Godfrey test in R, we can use the bgtest(y ~ x, order = p) function from the lmtest library.
This tutorial provides an example of how to use this syntax in R.
Example: Breusch-Godfrey Test in R
First, let’s create a fake dataset that contains two predictor variables (x1 and x2) and one response variable (y).
#create dataset df <- data.frame(x1=c(3, 4, 4, 5, 8, 9, 11, 13, 14, 16, 17, 20), x2=c(7, 7, 8, 8, 12, 4, 5, 15, 9, 17, 19, 19), y=c(24, 25, 25, 27, 29, 31, 34, 34, 39, 30, 40, 49)) #view first six rows of dataset head(df) x1 x2 y 1 3 7 24 2 4 7 25 3 4 8 25 4 5 8 27 5 8 12 29 6 9 4 31
Next, we can perform a Breusch-Godfrey test using the bgtest() function from the lmtest package.
For this example, we’ll test for autocorrelation among the residuals at order p =3:
#load lmtest package library(lmtest) #perform Breusch-Godfrey test bgtest(y ~ x1 + x2, order=3, data=df) Breusch-Godfrey test for serial correlation of order up to 3 data: y ~ x1 + x2 LM test = 8.7031, df = 3, p-value = 0.03351
From the output we can see that the test statistic is X2 = 8.7031 with 3 degrees of freedom. The corresponding p-value is 0.03351.
Since this p-value is less than 0.05, we can reject the null hypothesis and conclude that autocorrelation exists among the residuals at some order less than or equal to 3.
How to Handle Autocorrelation
If you reject the null hypothesis and conclude that autocorrelation is present in the residuals, then you have a few different options to correct this problem if you deem it to be serious enough:
- For positive serial correlation, consider adding lags of the dependent and/or independent variable to the model.
- For negative serial correlation, check to make sure that none of your variables are overdifferenced.
- For seasonal correlation, consider adding seasonal dummy variables to the model.
How to Perform Simple Linear Regression in R
How to Perform Multiple Linear Regression in R
How to Perform a Durbin-Watson Test in R